Information for 6-AGTGGAACCA (Motif 28)

T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
Reverse Opposite:
C A G T C A T G T A C G C G A T G A C T A G T C G T A C C T G A A G T C A G C T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.659
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif239.5
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets50.6 +/- 25.3bp
Average Position of motif in Background49.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTGGAACCA
AGAGGAA---
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTGGAACCA
-GTGGAT---
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTGGAACCA
ACTGAAACCA
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGTGGAACCA
AATGGAAAAT
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGGAACCA
NNTGGAAANN
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTGGAACCA-
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C G T T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGGAACCA
AATGGAAAAT
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGGAACCA-
-GTGGGCCCCA
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTGGAACCA--
--TGGAACAGMA
 T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A A C G T A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGAACCA
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T T C G A T C A G G A C T C A T G T C A G C T G A G C T A A T G C G T A C G T C A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T