p-value: | 1e-8 |
log p-value: | -2.026e+01 |
Information Content per bp: | 1.915 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.2 +/- 21.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0059.1_Six6_1/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---AATAGGGTATCATATAT |
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PH0166.1_Six6_2/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---AATAGGGTATCAATATT |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA- -------GGCCATTAAC |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | AAGCTATGGCTATCAA --------GCTGTCAA |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAGCTATGGCTATCAA -----AAGGATATNTN |
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PH0165.1_Six6_1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---AATAGGGTATCAATTAT |
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PH0161.1_Six1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---GATGGGGTATCATTTTT |
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Dux/MA0611.1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA --------CCAATCAA |
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Six3/MA0631.1/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---GATAGGGTATCACTAAT |
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PH0163.1_Six3/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGCTATGGCTATCAA---- ---GATAGGGTATCACTAAT |
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