Information for 12-TCCTGTGCAAAACATG (Motif 24)

A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G
Reverse Opposite:
A T G C G T C A G C A T A C T G A G C T A C G T A G C T A C G T A C T G A T G C C G T A A G T C T G C A A C T G C T A G T C G A
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.703
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif32.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets57.1 +/- 23.9bp
Average Position of motif in Background46.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCCTGTGCAAAACATG
--AGGTGHCAGACA--
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCTGTGCAAAACATG
--AGGTGNCAGACAG-
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCCTGTGCAAAACATG----
------GCAAAACATTACTA
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCTGTGCAAAACATG
GGGCCGTGTGCAAAAA---
 A C G T A C G T A C G T A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCCTGTGCAAAACATG---
--AACACCAAAACAAAGGA
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCTGTGCAAAACATG-
-------AAGCACATGG
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TCCTGTGCAAAACATG---
--CAAATCCAGACATCACA
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTGCAAAACATG
GTGCCGTGTGCAAA-----
 A C G T A C G T A C G T A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCCTGTGCAAAACATG------
-----NNTATTACATGTANNNT
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCCTGTGCAAAACATG------
-----ANTATTACATGTANNNN
 A G C T A G T C T G A C A C G T T A C G C G A T A T C G G T A C G T C A C T G A T G C A C T G A A G T C C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T