Information for 9-TCCCTTVCAAATTCTC (Motif 20)

C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C
Reverse Opposite:
C T A G C G T A C T A G T G C A C G T A A C G T C G A T A C G T C A T G A C T G G C T A G T C A T C A G C T A G A T C G G T C A
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.576
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif79.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets47.2 +/- 28.5bp
Average Position of motif in Background51.6 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC-----
----GACCACATTCATACAAT
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TCCCTTVCAAATTCTC------
-------NNAATTCTCGNTNAN
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC------
-------AGTATTCTCGGTTGC
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTTVCAAATTCTC
TKCTGTTCCA-------
 A C G T C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC-
-------CACATTCCAT
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC------
--------ACATTCATGACACG
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC--
--------CAAATCACTG
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC-
-------CACATTCCAT
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TCCCTTVCAAATTCTC
-CTCATGAATATTCAT
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C
A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:TCCCTTVCAAATTCTC
ACCGTGACTAATTNN-
 C A G T T A G C A G T C A G T C A C G T C G A T T G A C G T A C G T C A G C T A G T C A G C A T A C G T A G T C G C A T A G T C
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T