Information for 12-AATAGCTTTT (Motif 29)

C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.274e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 7.5bp
Average Position of motif in Background47.6 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AATAGCTTTT
CCTTAATNGNTTTT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATAGCTTTT
AACAGCTGTT
 C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATAGCTTTT--
GCAACAGCTGTTGT
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATAGCTTTT
AACAGCTGTT
 C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AATAGCTTTT-
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATAGCTTTT
AAGATATCCTT-
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATAGCTTTT
AACAGCTGAT
 C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAGCTTTT
CCAAAAATAG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AATAGCTTTT-
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AATAGCTTTT
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T