Information for 10-CGGAGSCWGCMRA (Motif 23)

A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A G T C C G A T A C T G A T C G A G T C A C G T A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.8 +/- 28.4bp
Average Position of motif in Background41.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGAGSCWGCMRA
CGGAGC-------
 A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGGAGSCWGCMRA---
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGAGSCWGCMRA
-TGAGTCAGCA--
 A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGGAGSCWGCMRA
GCTGASTCAGCA--
 A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CGGAGSCWGCMRA--
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGGAGSCWGCMRA
NCGCGGACGTTG----
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGGAGSCWGCMRA
ACCGGAAGTG-----
 A C G T A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGAGSCWGCMRA--
CTGAGTCAGCAATTT
 A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGGAGSCWGCMRA----
GCTGAGTCAGCAATTTTT
 A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGAGSCWGCMRA---
NCTANGTCAGCAAATTT
 A C G T A G T C A C T G A C T G C G T A A C T G A T G C A G T C C G T A A C T G A G T C G T A C C T A G C G T A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T