Information for 4-CAGTCCACTT (Motif 11)

A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T
Reverse Opposite:
C T G A G T C A A C T G A C G T C T A G A C T G C T G A A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.864
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif114.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets55.8 +/- 25.2bp
Average Position of motif in Background49.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CAGTCCACTT
--ATCCAC--
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAGTCCACTT---
---ACCACTTGAA
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAGTCCACTT------
TAAGCCACTTGAATTT
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCACTT-
SSAATCCACANN
 A C G T A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CAGTCCACTT--
---ACCACTTAA
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CAGTCCACTT---
----CCACTTGAA
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGTCCACTT--
---ACCACTTAA
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGTCCACTT------
TAAGCCACTTAACATT
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGTCCACTT------
CTTAACCACTTAAGGAT
 A C G T A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGTCCACTT------
TAAGCCACTTGAAATT
 A G T C C G T A T C A G A G C T A G T C A G T C C G T A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T