Information for 4-CCAMCCCTGCTRAMAT (Motif 6)

G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
Reverse Opposite:
C T G A G C A T C A T G A C G T G A T C C G T A A C T G G T A C C G T A C T A G A C T G A C T G C A G T A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.605e+01
Information Content per bp:1.690
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.4 +/- 22.7bp
Average Position of motif in Background45.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT
AAATCACTGC------
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCAMCCCTGCTRAMAT
NNGCACCTTTCTCC---
 A C G T G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCAMCCCTGCTRAMAT
ATCCCCGCCCCTAAAA----
 A C G T A C G T A C G T A C G T G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAMCCCTGCTRAMAT
--CCCCCTGCTGTG--
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT
AAATCACAGCA-----
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT---
--AAATTTGCTGACTTAGA
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT
SNGCACCTGCHS----
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT
CCTCACCTG-------
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCAMCCCTGCTRAMAT
--NCACCTGTN-----
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCAMCCCTGCTRAMAT-
-------TGCTGACTCA
 G T A C T G A C C G T A G T A C G T A C G T A C A G T C A C G T A C T G A G T C C G A T C T A G G T C A G T A C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A