Information for 3-GKCMAGKRAGSCAGTT (Motif 5)

C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T
Reverse Opposite:
G T C A C T G A A T G C C G A T A T C G A T G C G A T C A G C T A G T C G T C A G T A C A G C T A C G T C T A G G T C A G T A C
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.625
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif144.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets51.1 +/- 25.8bp
Average Position of motif in Background50.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GKCMAGKRAGSCAGTT--
---AGGGAAGTCATTTCT
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GKCMAGKRAGSCAGTT-----
----NNNANTGCAGTGCNNTT
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GKCMAGKRAGSCAGTT--
--------TGGCAGTTGN
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GKCMAGKRAGSCAGTT------
------TAAGCCACTTAACATT
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GKCMAGKRAGSCAGTT-----
-----NNNTGGCAGTTGGTNN
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GKCMAGKRAGSCAGTT--
--------NNVCAGCTGB
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GKCMAGKRAGSCAGTT
TGCCCTGAGGGCA---
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GKCMAGKRAGSCAGTT---
-------VNAVCAGCTGGC
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GKCMAGKRAGSCAGTT------
------TAAGCCACTTGAATTT
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GKCMAGKRAGSCAGTT--
--------TGGCAGTTGG
 C A T G C A G T A G T C G T C A T C G A A C T G A C G T C T A G C T G A C T A G A T C G A T G C C G T A A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G