Information for 14-GAGAGAGAGAGAGATG (Motif 28)

C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
Reverse Opposite:
A G T C G T C A A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C
p-value:1e-2
log p-value:-4.642e+00
Information Content per bp:1.941
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGAGAGAGATG
AGAAAGTGAAAGTGA--
 A C G T C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGATG
GAAAGTGAAAGT----
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGATG
NNNACCGAGAGTNNN-
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGAGAGAGAGAGATG--
---AGATGKDGAGATAAG
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAGAGAGAGAGATG
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GAGAGAGAGAGAGATG
GAAAGTGAAAGT----
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GAGAGAGAGAGAGATG-
--TTGACCGAGAATTCC
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G A C G T
A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGAGAGAGATG-
GGAAAGCGAAACCAAAAC
 A C G T C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGATG
AGGTGNCAGACAG---
 C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGAGAGAGATG
GGGRAARRGRMCAGMTG
 A C G T C T A G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C G T C T A G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G