Information for 12-GGAGAGATCACAA (Motif 27)

A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A
Reverse Opposite:
A G C T C G A T A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T A G T C A G T C
p-value:1e-2
log p-value:-4.642e+00
Information Content per bp:1.945
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 22.2bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGATCACAA--
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGAGAGATCACAA
---AAGGTCAC--
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGATCACAA-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGAGATCACAA
--AGRGGTCA---
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGAGATCACAA-
--AAAGATCAAAGG
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGATCACAA-----
AADGAGVCANYASTACAGNC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGATCACAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGAGATCACAA---
--NCAGATAAGAANNN
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGAGATCACAA----
--AAAGATCAAAGGGTT
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGAGATCACAA
----AGATAASR-
 A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T