Information for 10-CCTAATGAGGCAG (Motif 24)

A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.976e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.7 +/- 36.3bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCTAATGAGGCAG-
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCTAATGAGGCAG-
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTAATGAGGCAG
-NTAATGAGCT--
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTAATGAGGCAG
NNTAATTAGN---
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTAATGAGGCAG
CCTAATTACC---
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTAATGAGGCAG
CCATATATGGNA-
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTAATGAGGCAG
NNTAATTANN---
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTAATGAGGCAG
GNTAATTANN---
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTAATGAGGCAG-
---NATGAGTCANN
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTAATGAGGCAG
-CTAATTAN----
 A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T A C G T