Information for 9-GCCATGYTTGTGC (Motif 19)

A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
Reverse Opposite:
C A T G A G T C G C T A A T G C G T C A G T C A C T G A A T G C T C G A A C G T A C T G C A T G A G T C
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.8 +/- 25.4bp
Average Position of motif in Background55.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGYTTGTGC
GCNGCCATCTTG----
 A C G T A C G T A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGYTTGTGC
GCCGCCATCTTG----
 A C G T A C G T A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGYTTGTGC--
NGTCACGCTTGGCTGC
 A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCATGYTTGTGC
--CATGCGGGTAC
 A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCATGYTTGTGC
GTCATN-------
 A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCATGYTTGTGC
AGTCACGC------
 A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCATGYTTGTGC---
CGTCACGCATGACTGCA
 A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCATGYTTGTGC
GTGCCACGCGACTG-
 A C G T A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCATGYTTGTGC
---AAGCTTG---
 A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCCATGYTTGTGC
GTCCGCCATTA------
 A C G T A C G T A C G T A C G T A C T G G A T C G T A C G T C A A G C T A T C G A G C T A C G T A C G T A T C G C G A T T C A G G T A C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T