Information for 3-CCSCACATTA (Motif 15)

G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A
Reverse Opposite:
C G A T C G T A C T G A A C G T A C T G A C G T A C T G T A G C A C T G A C T G
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.6 +/- 25.3bp
Average Position of motif in Background42.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NOTO/MA0710.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCSCACATTA--
--GCTAATTAGC
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCSCACATTA
AAACCGCAAA---
 A C G T A C G T A C G T G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCSCACATTA-
---CCAATTAA
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

GSX1/MA0892.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCSCACATTA--
--CCTAATTAAA
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCSCACATTA-
-AGCTCATTAT
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0032.1_Evx2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCSCACATTA-----
CACCGCTAATTAGCGGT
 A C G T A C G T G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCSCACATTA-----
CACCGCTAATTAGNNGN
 A C G T A C G T G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCSCACATTA--
--ACTAATTAAA
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A

HOXA2/MA0900.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCSCACATTA--
--CCTAATTACC
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCSCACATTA--
--ACTAATTAGC
 G T A C A G T C A T C G A G T C C G T A T G A C C G T A A G C T A C G T C G T A A C G T A C G T
A C G T A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C