Information for 6-GACTGGACMTTAG (Motif 13)

T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
Reverse Opposite:
G A T C C G A T G C T A C G T A A C G T A C T G A C G T A G T C G T A C C G T A A C T G A C G T A G T C
p-value:1e-8
log p-value:-2.031e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif32.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets71.8 +/- 20.3bp
Average Position of motif in Background50.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGACMTTAG--
NNATTGGACTTTNGNN
 A C G T T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACTGGACMTTAG
WDNCTGGGCA----
 A C G T T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GACTGGACMTTAG
TAAGCCACTTGAAATT--
 A C G T A C G T A C G T A C G T A C G T T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACTGGACMTTAG
--BNTGDCCTTG-
 T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACTGGACMTTAG
CGTCTAGACA----
 A C G T T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GACTGGACMTTAG---
NNNNTGACCTTTNNNN
 T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GACTGGACMTTAG
---TTGACTTTT-
 T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GACTGGACMTTAG
TAAGCCACTTGAAATT--
 A C G T A C G T A C G T A C G T A C G T T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GACTGGACMTTAG
-----BCMATTAG
 T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GACTGGACMTTAG-
----GGCCATTAAC
 T A C G T G C A A G T C A C G T A C T G A C T G C G T A A G T C T G C A A C G T C G A T C G T A C A T G A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C