Information for 5-AGCACAACCYTGA (Motif 11)

C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
Reverse Opposite:
C G A T A T G C G C T A C T A G C T A G A C T G A G C T G A C T A T C G C G A T A C T G G T A C G A C T
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.709
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif183.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets52.5 +/- 26.4bp
Average Position of motif in Background46.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCACAACCYTGA--
GATAACATCCTAGTAG
 A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGCACAACCYTGA-
---ATGACCTTGAA
 C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCACAACCYTGA
GGCCACACCCAN--
 A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCACAACCYTGA
ATTGCACAATA----
 A C G T A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCACAACCYTGA
AGCGGCACACACGCAA
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCACAACCYTGA---
NNNNATGACCTTGANTN
 A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCACAACCYTGA-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCACAACCYTGA
CCAGGAACAG------
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCACAACCYTGA
GGCCACACCCA---
 A C G T C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGCACAACCYTGA
-GGACCACCCACG
 C T G A A C T G G T A C C G T A T A G C C G T A C T G A A G T C A G T C A G T C C G A T T A C G G C T A
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G