p-value: | 1e-6 |
log p-value: | -1.445e+01 |
Information Content per bp: | 1.844 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 6.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 66.1 +/- 23.5bp |
Average Position of motif in Background | 48.0 +/- 32.9bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCTTTGTT---- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCATTGTTYB-- |
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YY1/MA0095.2/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---SCCAYTKTKGTRC GCNGCCATCTTG---- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----SCCAYTKTKGTRC TGTTCCCATTGTGTACT |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC NCCATTGTTC--- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCWTTGTY---- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCATTGTTNY-- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---SCCAYTKTKGTRC ANNTCCATTGTTCNNN |
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SOX9/MA0077.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCATTGTTC--- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCCAYTKTKGTRC -CCATTGTTTT-- |
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