Information for 6-CTCAGTGCTG (Motif 20)

A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
Reverse Opposite:
G A T C C G T A A C T G T A G C C T G A G T A C G A C T C T A G T G C A T C A G
p-value:1e-8
log p-value:-1.865e+01
Information Content per bp:1.667
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif11.99%
Number of Background Sequences with motif2591.1
Percentage of Background Sequences with motif5.33%
Average Position of motif in Targets50.6 +/- 26.1bp
Average Position of motif in Background49.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCAGTGCTG-----
CGAACAGTGCTCACTAT
 A C G T A C G T A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGCTG
TTAAGTGCTT
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTG
-TCAGTCTT-
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCAGTGCTG
TTRAGTGSYK
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGCTG
TTAAGTGC--
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGCTG
TTAAGTGGN-
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGCTG
TTAAGTGGT-
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTG--
-AATTTGCTGAC
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCAGTGCTG-----
-----TGCTGACTCA
 A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTGCTG--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G A T C C T G A C A T G G A C T A T C G T G A C G C A T C T A G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T