Information for 4-GTCTTTGAAT (Motif 13)

A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T
Reverse Opposite:
C G T A A G C T A C G T G T A C C G T A G T C A C G T A T A C G C T G A T A G C
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.843
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif167.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets44.9 +/- 28.4bp
Average Position of motif in Background50.7 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:GTCTTTGAAT-
--ATTTGAATT
 A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:GTCTTTGAAT---
---TTTGAAACCG
 A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTCTTTGAAT-
-CCTTTGATGT
 A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTGAAT---
TNCCTTTGATCTTN
 A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTGAAT-
TNCCTTTGATGT
 A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCTTTGAAT-
-CCTTTGAWGT
 A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTGAAT------
NTTNTATGAATGTGNNC
 A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTCTTTGAAT----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTCTTTGAAT----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCTTTGAAT----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A T C G A G C T A T G C A C G T A C G T A C G T A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A