Information for 2-GTCACAATCT (Motif 10)

A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.935
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif33.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.2 +/- 29.4bp
Average Position of motif in Background49.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCACAATCT-
--GACAATGNN
 A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCACAATCT----
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTCACAATCT
-NAACAAT--
 A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCACAATCT
--AACAAT--
 A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCACAATCT
GTAAACAAT--
 A C G T A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCACAATCT-
NNCNNAACAATTNT
 A C G T A C G T A C G T A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCACAATCT---
YDGHTACAWTGTADC
 A C G T A C G T A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCACAATCT---
TWGHWACAWTGTWDC
 A C G T A C G T A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCACAATCT---
---CAAATCACTG
 A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCACAATCT-
---CCAATCAA
 A C T G G C A T A G T C C G T A G T A C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A