Information for 6-TTCCCACTTC (Motif 9)

A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A C T G A C T G A C T G G T C A C G T A
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.928
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif60.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.3 +/- 22.3bp
Average Position of motif in Background55.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TTCCCACTTC--
--ACCACTTGAA
 A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TTCCCACTTC-
--ACCACTTAA
 A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTCCCACTTC
HTTTCCCASG--
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTCCCACTTC-
--ACCACTTAA
 A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTCCCACTTC--
---CCACTTGAA
 A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTCCCACTTC----
--ACCACATCCTGT
 A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTCCCACTTC---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCCCACTTC
ATTAACACCT-
 A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCACTTC
TTTCACACCT-
 A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCACTTC
KTTCACACCT-
 A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G T C A C G T A C G T G T A C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T