Information for 1-AGGAAGGCCC (Motif 4)

C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C
Reverse Opposite:
C T A G C T A G A T C G A G T C G T A C G C A T A C G T A G T C A G T C G C A T
p-value:1e-9
log p-value:-2.083e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif125.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets44.9 +/- 30.7bp
Average Position of motif in Background49.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGAAGGCCC-
-GGAAANCCCC
 C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGAAGGCCC-
-GGAAATCCCC
 C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGAAGGCCC--
GGGAAATCCCCN
 C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGAAGGCCC-
-GGAAATTCCC
 C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGGCCC
TGGGGAAGGGCM
 A C G T A C G T C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAGGCCC
NDCAGGAARTNN-
 A C G T A C G T A C G T C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGAAGGCCC
AVCAGGAAGT---
 A C G T A C G T A C G T C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGAAGGCCC
ANCAGGAAGT---
 A C G T A C G T A C G T C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGGAAGGCCC--
----AGGCCTNG
 C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGGCCC--
GGAGAAAGGTGCGA
 A C G T A C G T C G T A A C T G A C T G G T C A C G T A A C T G A C T G A T G C A G T C A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A