Information for 8-AATTGARTTA (Motif 13)

C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G C T A C G T A T G C C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-9.147e+00
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets38.6 +/- 14.7bp
Average Position of motif in Background56.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2b/MA0681.1/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-AATTGARTTA
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-AATTGARTTA
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AATTGARTTA
TAATTTAATTA
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---AATTGARTTA---
NNNTATTGAATTGNNN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AATTGARTTA-
TAATTNVATTAN
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AATTGARTTA
YTAATYNRATTA
 A C G T A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATTGARTTA
TAATTGATTA-
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATTGARTTA-
-ATTGATTYND
 C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AATTGARTTA
TGATTAAATTA
 A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AATTGARTTA--
NWTGATTRGRTTAWN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A T C G C G T A C T G A A C G T A C G T C T G A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C