Information for 1-TGATCCCTCA (Motif 4)

A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A
Reverse Opposite:
C A G T A C T G C G T A C T A G C T A G A T C G C G T A A C G T A G T C G T C A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.814
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif115.6
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.7 +/- 29.1bp
Average Position of motif in Background46.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCTCA
ATAATCCC---
 A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCTCA--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TGATCCCTCA-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCTCA--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGATCCCTCA
CTTAATCCC---
 A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGATCCCTCA
TAATCCCN--
 A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCTCA
TTAATCCC---
 A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCCTCA-
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCTCA--
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCCTCA-
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G A T A T G C A G T C A G T C C G A T A G T C G T C A A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A