Information for 7-TGACAKTCTMYTT (Motif 12)

A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C A G T C G T A A C T G C G T A G T A C A C G T A C T G A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.747e+01
Information Content per bp:1.893
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 22.3bp
Average Position of motif in Background49.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGACAKTCTMYTT
TTGACAG-------
 A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGACAKTCTMYTT
TTGACAGG------
 A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGACAKTCTMYTT
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGACAKTCTMYTT
ARNTGACA--------
 A C G T A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGACAKTCTMYTT
TTGACAGC------
 A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGACAKTCTMYTT
RHTGWCAR-------
 A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGACAKTCTMYTT
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGACAKTCTMYTT
SCTGTCAVTCAV---
 A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGACAKTCTMYTT
GTATTGACAGGTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGACAKTCTMYTT
NCTGTCAATCAN---
 A C G T A C G T A C G T A C T G G T C A A G T C C G T A A C T G A C G T A G T C A C G T G T A C A G T C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T