Information for 7-ACCGCGGGRSTTGAGG (Motif 9)

C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A G T C C G T A C T G A A T G C A G T C G A T C A G T C A G T C A C T G A G T C A C T G A C T G A G C T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.4 +/- 17.5bp
Average Position of motif in Background45.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACCGCGGGRSTTGAGG
-NCGCGGACGTTG---
 C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACCGCGGGRSTTGAGG
NCNCAGCGGGGGGTC---
 A C G T A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACCGCGGGRSTTGAGG
NCGCAGCGGGGGGTC---
 A C G T A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ACCGCGGGRSTTGAGG
CACAGCGGGGGGTC---
 A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ACCGCGGGRSTTGAGG
--GGCGGGGGCGGGGG
 C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:ACCGCGGGRSTTGAGG---
----------TTGCGGTTT
 C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

POL001.1_MTE/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ACCGCGGGRSTTGAGG
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:ACCGCGGGRSTTGAGG-
-----GGGAATTGTAGT
 C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--ACCGCGGGRSTTGAGG
DCTCAGCAGG--------
 A C G T A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--ACCGCGGGRSTTGAGG
DCHCAGCAGGRGGCC---
 A C G T A C G T C T G A A G T C G T A C T C A G G T A C C T A G A C T G C T A G C T A G T A C G A G C T G A C T A C T G G T C A A C T G A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T