Information for 9-VCTAAGGTTG (Motif 28)

T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
Reverse Opposite:
A T G C C G T A T C G A T G A C A T G C A C G T G C A T C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.655e+01
Information Content per bp:1.785
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif184.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets53.8 +/- 28.0bp
Average Position of motif in Background50.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:VCTAAGGTTG
---AAGCTTG
 T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--VCTAAGGTTG----
TCGCGAAGGTTGTACT
 A C G T A C G T T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Znf423/MA0116.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----VCTAAGGTTG-
GGCACCCAGGGGTGC
 A C G T A C G T A C G T A C G T T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-VCTAAGGTTG
NNATAAGGNN-
 A C G T T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-VCTAAGGTTG
TGCTGTGATTT
 A C G T T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:VCTAAGGTTG-----
-CTAATATTGCTAAA
 T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:VCTAAGGTTG-----
-CTAATATTGCTAAA
 T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:VCTAAGGTTG
GCAGTGATTT
 T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--VCTAAGGTTG
TGCCTGAGGCN-
 A C G T A C G T T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:VCTAAGGTTG-
---NNNANTGA
 T G A C A G T C A C G T C G T A C G T A A T C G A C T G A G C T A C G T A T C G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A