Information for 12-CGGGCACARCCTC (Motif 26)

A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A G C T A C G T A C T G A C G T A C T G A G T C A G T C T A G C C T A G
p-value:1e-7
log p-value:-1.672e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.7 +/- 25.6bp
Average Position of motif in Background45.8 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGGCACARCCTC
-GGACACACCCCC
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGGCACARCCTC
CCAGGAACAG----
 A C G T A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGGCACARCCTC
-GGCCACACCCAN
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGCACARCCTC
NNNNTTGGGCACNNCN--
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGGCACARCCTC-
--GCCACRCCCACY
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C A C G T
A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGGCACARCCTC--
AGCGGCACACACGCAA
 A C G T A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGCACARCCTC
-GGCCACACCCA-
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGGCACARCCTC
--GCCACACCCA-
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCACARCCTC
NGTGGGCAT------
 A C G T A C G T A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGCACARCCTC-
--GGCCCCGCCCCC
 A G T C A C T G C T A G A C T G A G T C C G T A G T A C C G T A C T A G A G T C A G T C G A C T A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C