Information for 13-GVCCCTCAAGAAGCCC (Motif 25)

A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
Reverse Opposite:
A C T G A C T G A T C G A G T C A C G T A C G T A G T C A G C T G C A T A C T G C T G A T A C G A T C G C T A G A G T C T G A C
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.7 +/- 25.5bp
Average Position of motif in Background45.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC
--------NGAAGC--
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:10
Orientation:forward strand
Alignment:GVCCCTCAAGAAGCCC
----------CAGCC-
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC--
--NNNTTAGGTAGCNTNT
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C A C G T A C G T
A C G T A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GVCCCTCAAGAAGCCC
AGCCACTCAAG------
 A C G T A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC
TGACCTNTAGTAACCC
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC
--GGCTCYAKCAYC--
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC
ANTTCTCAGGAANNN-
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GVCCCTCAAGAAGCCC
ATGCCCTGAGGC-----
 A C G T A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GVCCCTCAAGAAGCCC
--TGCTGASTCAGC--
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GVCCCTCAAGAAGCCC--
--ATGTACAGTAGCAAAG
 A C T G T C A G A G T C T A G C A T G C A G C T T G A C C G T A C T G A A C T G G T C A C G T A A C T G A T G C G T A C G T A C A C G T A C G T
A C G T A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G