Information for 9-CCTCTCCCGGCTGAGT (Motif 14)

A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C A C G T A G T C C T G A A C T G A G T C A G T C A C T G C T A G A C T G C G T A A C T G C G T A C T A G A T C G
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 25.2bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCTCTCCCGGCTGAGT
---CCCCCTGCTGTG-
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCCCGGCTGAGT
ACCACTCTCGGTCAC--
 A C G T A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCTCTCCCGGCTGAGT
------CCTGCTGAGH
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTCTCCCGGCTGAGT
-GGCCYCCTGCTGDGH
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTCTCCCGGCTGAGT
CCACTTCCGGC-----
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTCTCCCGGCTGAGT
-GACCCCCCGCTGCGC
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCTCTCCCGGCTGAGT---
----TCCCAGMCRAGCCCC
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTCTCCCGGCTGAGT--
---TCNCCTGCTGNGNNN
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTCTCCCGGCTGAGT
-GACCCCCCGCTGTG-
 A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTCCCGGCTGAGT
NCCACTTCCGG------
 A C G T A T G C A G T C G C A T T G A C A C G T A G T C A G T C A G T C A C T G A C T G A G T C A G C T A C T G C G T A A C T G C G A T
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T