Information for 4-CAGTCCGGGCYCTCGG (Motif 6)

A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
Reverse Opposite:
A G T C A G T C T A C G G C T A T C A G C T A G A C T G A G T C A G T C G T A C C T A G A C T G C T G A A T G C C A G T C T A G
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.762
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 16.2bp
Average Position of motif in Background70.5 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGTCCGGGCYCTCGG
-WDNCTGGGCA-----
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGTCCGGGCYCTCGG
CTGTCTGG--------
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGTCCGGGCYCTCGG
---TNNGGGCAG----
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGTCCGGGCYCTCGG
ATGCCCGGGCATGT--
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGTCCGGGCYCTCGG
----CTAGGCCT----
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCCGGGCYCTCGG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCGGGCYCTCGG
VBSYGTCTGG--------
 A C G T A C G T A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGTCCGGGCYCTCGG
GGGGCCGAGGCCTG---
 A C G T A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGTCCGGGCYCTCGG
GAGSCCGAGC------
 A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCGGGCYCTCGG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C G T C A A T C G A G C T A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C A G T A G T C A C T G C T A G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T