Information for 13-CTCACATCACACA (Motif 27)

T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A
Reverse Opposite:
C G A T T A C G C A G T A C T G C G A T A T C G T G C A C A G T A T C G C G A T T A C G C G T A A T C G
p-value:1e-4
log p-value:-9.492e+00
Information Content per bp:1.537
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 21.8bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCACATCACACA
ATCACCCCAC---
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCACATCACACA-----
--AGCGGCACACACGCAA
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCACATCACACA-----
--CGAAGCACACAAAATA
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCACATCACACA
CNGTCACGCCAC---
 A C G T A C G T T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCACATCACACA-
------TCACACCT
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCACATCACACA--
----CTTCACACCTA
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCACATCACACA
ATCACCCCAT---
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCACATCACACA-
------TCACACCT
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCACATCACACA
ATCACCCCAT---
 T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCACATCACACA---
TCACCCATCAATAAACA
 A C G T T A G C G C A T A T G C G C T A T A G C G T C A A C G T T A G C G C T A T A G C G T C A A T G C G C T A A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A