Information for 1-CASRRKGKGSAGYCCM (Motif 1)

A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
Reverse Opposite:
A C T G C T A G A C T G C T A G A T G C A C G T A T C G A T G C G T C A A G T C G T C A A G C T G A C T A T C G A C G T A C T G
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.801
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.1 +/- 25.2bp
Average Position of motif in Background48.9 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CASRRKGKGSAGYCCM
SMCAGTCWGAKGGAGGAGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CASRRKGKGSAGYCCM-
-----GGGGGAATCCCC
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CASRRKGKGSAGYCCM
CACAGCGGGGGGTC--
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CASRRKGKGSAGYCCM--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CASRRKGKGSAGYCCM
NCNCAGCGGGGGGTC--
 A C G T A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CASRRKGKGSAGYCCM
-RGKGGGCGGAGC---
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CASRRKGKGSAGYCCM-
----AGGGGAATCCCCT
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CASRRKGKGSAGYCCM---
--NTNNNAGGAGTCTCNTN
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C A C G T A C G T A C G T
A C G T A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CASRRKGKGSAGYCCM--
-----AGGGGAATCCCCT
 A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CASRRKGKGSAGYCCM
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T C T A G A C G T A T C G A T G C C G T A A T C G A G T C A G T C A G T C T G A C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T