Information for 8-KAGAGTTMAC (Motif 29)

A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T G T A C
p-value:1e-3
log p-value:-7.682e+00
Information Content per bp:1.902
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.6 +/- 23.8bp
Average Position of motif in Background49.7 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-KAGAGTTMAC------
TGATTGTTAACAGTTGG
 A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---KAGAGTTMAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

MYBL1/MA0776.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KAGAGTTMAC---
-ACCGTTAACGGT
 A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T
A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KAGAGTTMAC
-AGRGGTCA-
 A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--KAGAGTTMAC-----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---KAGAGTTMAC----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--KAGAGTTMAC-----
NNNTTAGTTAACTNANN
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KAGAGTTMAC
--AAGGTCAC
 A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------KAGAGTTMAC
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KAGAGTTMAC---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G A T A C G T G T A C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G