Information for 10-GCSSMRGMTTKTTKSC (Motif 21)

A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C C G T A C T G A G T C A C G T A C G T A A C T G A G T C G A T C C A T G T A G C A T C G A C T G A G T C
p-value:1e-6
log p-value:-1.537e+01
Information Content per bp:1.803
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 23.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCSSMRGMTTKTTKSC
-------ATTGTT---
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCSSMRGMTTKTTKSC
-------ATTGTTA--
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCSSMRGMTTKTTKSC--
------SCHTGTTTACAT
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCSSMRGMTTKTTKSC----
------TTTTTTTTCNNGTN
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

FOXO3/MA0157.2/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GCSSMRGMTTKTTKSC
--------TTGTTTAC
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCSSMRGMTTKTTKSC
ATGCCCGGGCATGT----
 A C G T A C G T A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCSSMRGMTTKTTKSC
-------ATTGTTTAN
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCSSMRGMTTKTTKSC-
-----TGATTTATGGCC
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GCSSMRGMTTKTTKSC---
-------CNTGTTTACATA
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCSSMRGMTTKTTKSC-
-----TGATTTATGGCC
 A C T G A G T C A T G C A T C G G T A C C T A G A C T G G T A C A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C