Information for 20-TGGAGTGGAGTTA (Motif 30)

A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A G T A C C G A T A T G C A G T C C G T A A G T C A C G T A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 32.3bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGAGTGGAGTTA
BTBRAGTGSN----
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGTGGAGTTA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGAGTGGAGTTA
TTRAGTGSYK---
 A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGAGTTA
CTYRAGTGSY----
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGAGTGGAGTTA
TTGAGTGSTT---
 A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGAGTTA
NTCAAGTGG-----
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGAGTTA
CTTGAGTGGCT---
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGAGTGGAGTTA
----GTGGAT---
 A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGAGTGGAGTTA---
----GTGGCGTGACNG
 A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGTGGAGTTA
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C T G A C G T A C G T C G T A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T