Information for 6-TTGTKWTAYSMWKGKT (Motif 9)

A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
Reverse Opposite:
C G T A G T A C A G T C G T A C C G T A C A G T A T C G C T G A A C G T C G T A C G A T G T C A C G T A A G T C C G T A C G T A
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.799
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 30.6bp
Average Position of motif in Background70.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTKWTAYSMWKGKT
ATTGTTTAN--------
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGTKWTAYSMWKGKT
NNTTTTGTTTTGATNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTKWTAYSMWKGKT
CCATTGTTNY---------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTGTKWTAYSMWKGKT
TTCAATTGTTCTAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTKWTAYSMWKGKT
ATTGTT-----------
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGTKWTAYSMWKGKT
NCNTTTGTTATTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.57
Offset:-10
Orientation:reverse strand
Alignment:----------TTGTKWTAYSMWKGKT
TNNANNTCTATTGTTNTNNANN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGTKWTAYSMWKGKT
ATTGTTA----------
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGTKWTAYSMWKGKT
TAATTGTTCTAAAC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTGTKWTAYSMWKGKT
CCATTGTTTT---------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T C G T A A G C T A T G C G T A C C G A T A C T G A C T G C A G T C G A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T