Information for 5-TRGTATATGCTTTYKY (Motif 8)

A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
Reverse Opposite:
C T G A G T A C C T A G C G T A C G T A C G T A C T A G G T A C C G T A G A C T C T G A C G A T G T C A G A T C A G T C C G T A
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.673
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif15.62%
Number of Background Sequences with motif101.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets40.2 +/- 12.1bp
Average Position of motif in Background52.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TRGTATATGCTTTYKY
NNNTTAATTGGTTTTT-
 A C G T A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TRGTATATGCTTTYKY
-AAGATATCCTT----
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TRGTATATGCTTTYKY
---TRTTTACTTW---
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TRGTATATGCTTTYKY
---TGTTTACTTT---
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TRGTATATGCTTTYKY
--GHATATKCAT----
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TRGTATATGCTTTYKY
-------TGTTTATTT
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TRGTATATGCTTTYKY---
-----TTTTTTTTCNNGTN
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:TRGTATATGCTTTYKY
-------TGTTTAC--
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TRGTATATGCTTTYKY
-TTCATTTGCATAT--
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TRGTATATGCTTTYKY
----ATTTGCATAT--
 A C G T C T A G C A T G A C G T C G T A G A C T C G T A C G A T C A T G A G T C C G A T A C G T C G A T A G T C A C T G A G C T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T