Information for 3-RAGGAAMKGYSAG (Motif 6)

C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G C T A G A G T C G T A C A C G T A C G T A C G T A G T C A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.2 +/- 13.3bp
Average Position of motif in Background43.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAMKGYSAG
AGAGGAAGTG----
 A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RAGGAAMKGYSAG
ANGNAAAGGTCA-
 C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAMKGYSAG
AGAGGAA-------
 A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--RAGGAAMKGYSAG
NDCAGGAARTNN---
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RAGGAAMKGYSAG
AAAGRGGAAGTG----
 A C G T A C G T A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RAGGAAMKGYSAG
NACAGGAAAT-----
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RAGGAAMKGYSAG
ANCAGGAAGT-----
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RAGGAAMKGYSAG
AVCAGGAAGT-----
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAMKGYSAG
ACAGGAAGTG----
 A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RAGGAAMKGYSAG
ACAGGAAGTG----
 A C G T C T A G C G T A A C T G A C T G C G T A C G T A T G A C C A T G A C T G A G T C A T G C C G T A A C T G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T