Information for 13-GGAATTATGT (Motif 43)

A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
p-value:1e-2
log p-value:-6.600e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGAATTATGT--
NNCTNAATTATGANN
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTATGT
NGGGATTA---
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGAATTATGT---
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAATTATGT
--AATTATT-
 A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGAATTATGT
GCAATTAA--
 A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGAATTATGT
NCTGGAATGC---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGAATTATGT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGAATTATGT---
GTCGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAATTATGT
CCAATTAC--
 A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTATGT
NNGGATTAGN-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T