Information for 22-WAWAAWWTTWTWT (Motif 40)

C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T
Reverse Opposite:
C G T A C G A T C G T A C G T A C G T A C G T A C G A T C G A T A C G T A C G T C G A T A C G T C G A T
p-value:1e-3
log p-value:-7.293e+00
Information Content per bp:1.831
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
-----TTTTTTTTCNNGTN
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
--NTNAATTTTATTGNATT
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
--GNATTTTTTTTTTGANC
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
---NNANTTTTATTGGNNN
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
----NNTTTNTTTTNGNNN
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
--NNNNTTTTTTTTTNAAC
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT---
------NTTTTATTGG
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT------
---NNAATTTTATTGGNTN
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----WAWAAWWTTWTWT
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:WAWAAWWTTWTWT---
------NTTTTATGAC
 C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G A T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C