Information for 20-CATTCTTTCGTAT (Motif 38)

A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.293e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CATTCTTTCGTAT------
--TNNTTTCGTATTNNANN
 A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTCTTTCGTAT--
-NNTTTTTCTTATNT
 A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATTCTTTCGTAT--
---ACTTTCGTTTCT
 A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CATTCTTTCGTAT-
NNCATTCATTCATNNN
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTCTTTCGTAT--
GNNATTTGTCGTAANN
 A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATTCTTTCGTAT-
TTTTTTTTCNNGTN
 A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTCTTTCGTAT
CACATTCCAT-----
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATTCTTTCGTAT
NCCATTGTTY-----
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTCTTTCGTAT
CACATTCCAT-----
 A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATTCTTTCGTAT
CCATTGTTYB----
 A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T