Information for 6-CATGTTGCGT (Motif 34)

A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.293e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTGCGT
CCACCTGTTGCAT
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTGCGT--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CATGTTGCGT
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTGCGT--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATGTTGCGT--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATGTTGCGT----
----TTGCGTGCVA
 A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CATGTTGCGT
GCNGCCATCTTG---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CATGTTGCGT---
---ATTGCGCAAT
 A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATGTTGCGT---
---ATTGCGCAAT
 A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATGTTGCGT---
---ATTGCGCAAT
 A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T