Information for 3-GCGCTGGTTT (Motif 31)

A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A G T C C G T A A C T G A G T C A C T G A G T C
p-value:1e-3
log p-value:-7.293e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background54.6 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGGTTT
TGCTGTGATTT
 A C G T A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCGCTGGTTT----
----TGGTTTCAGT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGCTGGTTT
GCAGTGATTT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCGCTGGTTT
GCTGTGGTTT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGCTGGTTT
NNTGTGGTTT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGCTGGTTT
-NGCTN----
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGCTGGTTT
AAACCGGTTT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCGCTGGTTT-
-CTGTGGTTTN
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGGTTT------
TNNNATGATTTCNNCNN
 A C G T A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGCTGGTTT-
-CNGTGATTTN
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G