Information for 2-TGTGYRTMTTTCAGTA (Motif 3)

C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T T C G A A G T C C G A T A T C G T G C A C T G A T C G A A C G T C G T A A G C T C T G A T A G C G T C A A T G C C G T A
p-value:1e-10
log p-value:-2.303e+01
Information Content per bp:1.675
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif15.62%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.2 +/- 17.6bp
Average Position of motif in Background44.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGTGYRTMTTTCAGTA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TGTGYRTMTTTCAGTA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYRTMTTTCAGTA
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TGTGYRTMTTTCAGTA--
---NNNCTTTCCAGGAAA
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.46
Offset:7
Orientation:forward strand
Alignment:TGTGYRTMTTTCAGTA-
-------CTTCCNGGAA
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.46
Offset:5
Orientation:forward strand
Alignment:TGTGYRTMTTTCAGTA----
-----CTGAGTCAGCAATTT
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:TGTGYRTMTTTCAGTA
------TGAGTCAGCA
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:TGTGYRTMTTTCAGTA--
----NGCTTTCTAGGAAN
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--TGTGYRTMTTTCAGTA
CBTGTTTAYAWW------
 A C G T A C G T C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.45
Offset:6
Orientation:forward strand
Alignment:TGTGYRTMTTTCAGTA------
------ATGTACAGTAGCAAAG
 C G A T A T C G A C G T A C T G A G C T T C A G C G A T G T C A A C G T A G C T A C G T A T G C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G