Information for 16-NGSKCGGATCSGA (Motif 29)

T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
Reverse Opposite:
C G A T A G T C A T G C C A T G C T G A A G C T A G T C A G T C T A C G G T A C A T C G T G A C A C G T
p-value:1e-3
log p-value:-8.657e+00
Information Content per bp:1.646
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.0 +/- 4.0bp
Average Position of motif in Background46.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--NGSKCGGATCSGA---
AGAGTGCTGATTGGTCCA
 A C G T A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:NGSKCGGATCSGA
-GCTCGGSCTC--
 T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:NGSKCGGATCSGA
--CGCAGCTGCG-
 T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:NGSKCGGATCSGA
-GGGCGGGACC--
 T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-NGSKCGGATCSGA
GGGGGCGGGGCC--
 A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----NGSKCGGATCSGA
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:NGSKCGGATCSGA
------GCTCCG-
 T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--NGSKCGGATCSGA
AGGGGGCGGGGCTG-
 A C G T A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----NGSKCGGATCSGA-
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--NGSKCGGATCSGA
GGGGCTYGKCTGGGA
 A C G T A C G T T A C G A C T G T A G C C A T G A T G C T C A G T C A G T C G A A G C T G T A C T A C G T C A G G C T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A