Information for 25-CGTGGAGGGTGCTGAG (Motif 42)

A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C C G T A A C T G A G T C C T G A A G T C A G T C G T A C A C G T A G T C A G T C C G T A T A G C A C T G
p-value:1e-3
log p-value:-7.444e+00
Information Content per bp:1.936
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 27.7bp
Average Position of motif in Background53.2 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTGGAGGGTGCTGAG
-GTGGAT---------
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGAGGGTGCTGAG
CTTCGTGGGGGGTC-----
 A C G T A C G T A C G T A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGTGGAGGGTGCTGAG
GCTTCGTGGGGGGTCT----
 A C G T A C G T A C G T A C G T A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CGTGGAGGGTGCTGAG---
---------TGCTGACTCA
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGTGGAGGGTGCTGAG
GGAGCTGTCCATGGTGCTGA-
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CGTGGAGGGTGCTGAG-------
--------NTGCTGAGTCATCCN
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGTGGAGGGTGCTGAG----
-----AAANTGCTGACTNAG
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGTGGAGGGTGCTGAG
-----AATTTGCTGAC
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGAGGGTGCTGAG
CTTCGCGGGGGGTC-----
 A C G T A C G T A C G T A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGTGGAGGGTGCTGAG
CGTGGGTGGTCC----
 A G T C A T C G A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G C T A C T G A G T C A C G T A C T G C T G A A C T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T