Information for 11-GTCAATGACC (Motif 33)

T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
Reverse Opposite:
T C A G T C A G C G A T A T G C T G C A C A G T C A G T T A C G T G C A A G T C
p-value:1e-6
log p-value:-1.505e+01
Information Content per bp:1.681
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif394.3
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets45.8 +/- 31.4bp
Average Position of motif in Background51.1 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GTCAATGACC--
AGGTCANTGACCTN
 A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTCAATGACC---
NNAATTAATGACCNNN
 A C G T A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTCAATGACC
SCTGTCAVTCAV-
 A C G T A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTCAATGACC
---CATGAC-
 T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTCAATGACC
NCTGTCAATCAN-
 A C G T A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GTCAATGACC-
-----TGACCT
 T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCAATGACC
AGTCACGC---
 A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAATGACC
GACAATGNN-
 T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCAATGACC
NTGTCAN-----
 A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCAATGACC--
TAATTCAATGAAGTG
 A C G T A C G T A C G T T C A G A C G T A T G C G T C A G T C A A C G T T A C G G C T A A G T C A G T C A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G