Information for 14-ACAATGGGAGTGA (Motif 28)

C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 24.3bp
Average Position of motif in Background24.0 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATGGGAGTGA
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGGGAGTGA
VRAACAATGG------
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACAATGGGAGTGA
GAACAATGGN-----
 A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGGGAGTGA
AACAAAGG------
 A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGGGAGTGA
RACAAWGG------
 A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACAATGGGAGTGA
GAACAATGG------
 A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAATGGGAGTGA-
AACAATGGTAGTGTT
 A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACAATGGGAGTGA
RAACAATGGN-----
 A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACAATGGGAGTGA
AATGAACAATGGAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGGGAGTGA
AAAACAATGG------
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G A C G T C T A G C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T