Information for 9-TTTTGGCCTTACA (Motif 17)

A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A C G T A A C T G C T A G T A G C A G T C C T G A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.3 +/- 22.8bp
Average Position of motif in Background35.0 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb/MA0857.1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTGGCCTTACA
TGACCTTTTGACCTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTTGGCCTTACA
--GTGACCTT---
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCCTTACA
-BNTGDCCTTG--
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCCTTACA-
TTTTGGCGGGAAAA
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTTGGCCTTACA
---TGACCTYA--
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TTTTGGCCTTACA
TTGACCTTTTGACCTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTTTGGCCTTACA
---TGACCTTGAN
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTTTGGCCTTACA
--TTGGCA-----
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGGCCTTACA
WCATTTTGKCCTCYT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTTGGCCTTACA
---TGACCTTGAV
 A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T C G T A G T A C C G T A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A